Xtras Installer for Amira-Avizo 2023.1 and Prior
Add-on

Xtras Installer for Amira-Avizo 2023.1 and Prior

Recipe (hxrecipe), Recipe ISP, IVP, A2D, Deep learning model, Python (pyscro), Tcl, XPand module, Project (hx, pgo), Template, Demo, Data, Misc

30 Jun 2022 - The Xtras Installer is a tool that provides an easy way to install resources from the Xtra Library on to your local machine.  Learn more

Object Separation using Random-Walk Distance Map
Add-on

Object Separation using Random-Walk Distance Map

Recipe ISP, IVP, A2D, Demo, Data

3 Jun 2022 - Recipe utilizing an object separation workflow relying on the Random-Walk Distance Map. It is more robust than Separate Object for noisy segmentation or non-spherical shapes.  Learn more

Bone Segmentation Workflow for Murine Hindpaw
Add-on How-to

Bone Segmentation Workflow for Murine Hindpaw

Recipe ISP, IVP, A2D, Demo, Data

28 Apr 2022 - Semi-automatic workflow and recipe for high-throughput bone segmentation of murine hindpaw micro-CT datasets.  Learn more

Marker Based Watershed Recipe
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Marker Based Watershed Recipe

Recipe ISP, IVP, A2D

17 Nov 2020 - A recipe for applying a Marker Based Watershed (as in the Segmentation Editor) from the Project View.  Learn more

Relative Area Fraction for Amira-Avizo2D
Add-on How-to

Relative Area Fraction for Amira-Avizo2D

Recipe ISP, IVP, A2D, Python (pyscro), Data, Misc

5 Oct 2020 - This Xtra provides a module to help compute the area fraction of a label over the area of another label in Amira-Avizo2D.  Learn more

Segmentation of Pathological Osteocytes in an Undecalcified Piece of Mouse Bone using Amira-Avizo2D
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Segmentation of Pathological Osteocytes in an Undecalcified Piece of Mouse Bone using Amira-Avizo2D

Recipe ISP, IVP, A2D

3 Jul 2020 - This is a workflow to segment out osteocytes in mouse bone sample using Amira-Avizo2D.  Learn more

How to Use Deep Learning Models in Amira-Avizo2D Analyzer
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How to Use Deep Learning Models in Amira-Avizo2D Analyzer

Recipe ISP, IVP, A2D, Deep learning model, Data

3 Oct 2019 - Examples showing how to use AI (deep learning models) in an Analyzer recipe (hxisp).  Learn more