Welcome to the Xtra Library for
Thermo Scientific Amira, Avizo and PerGeos Software

Below you will find a collection of add-ons (recipes, scripts, demos,…) that will help you improve your day-to-day use of Amira-Avizo and PerGeos Software and make you gain both time and efficiency.
Use the Search field to look for specific keywords related to your domain of interest. The different filters also help you target specific resources.

Porosity in a battery separator

Porosity in a battery separator

Recipe ISP (hxisp,a2d), Demo, Data

The recipe classifies the pores in a battery separator (SEM image).

Learn more
Porosity in a polymer divider

Porosity in a polymer divider

Recipe ISP (hxisp,a2d), Demo, Data

The recipe detects pores in a polymer divider (SEM image).

Learn more
Porous silicon

Porous silicon

Recipe ISP (hxisp,a2d), Demo, Data

The recipe detects pores in a porous silicon.

Learn more
Porous Silicon Batch

Porous Silicon Batch

Recipe ISP (hxisp,a2d), Demo, Data

Batch processing of a subset of porous silicon SEM images.

Learn more
Particle agglomeration

Particle agglomeration

Recipe ISP (hxisp,a2d), Demo, Data

The recipe segments particles that are touching each other, and individual ones.

Learn more
Size distribution of Nb-Cu nanoparticles

Size distribution of Nb-Cu nanoparticles

Recipe ISP (hxisp,a2d), Demo, Data

The recipe segments the Nb particles and the Cu particles.

Learn more
Amira User's Guide translated to Japanese

Amira User's Guide translated to Japanese

Demo, Misc

You will find here a selection of Amira tutorials translated to Japanese.

Learn more
Porosity Clustering Analysis and Distance to Surface

Porosity Clustering Analysis and Distance to Surface

Recipe (hxrecipe), Project (hx, pgo), Demo, Data

This tutorial demonstrates the steps to quantify porosity distribution and the distance to surface analysis.

Learn more
Tutorial: Generate a DVC mesh of complex shapes

Tutorial: Generate a DVC mesh of complex shapes

Demo, Data

This tutorial described how to build a DVC mesh for specimens with complex shapes.

Learn more
Relative pore fraction

Relative pore fraction

Recipe (hxrecipe), Demo, Data

The calculation of a relative pore fraction for each separated grains.

Learn more
Length Distribution Analysis

Length Distribution Analysis

Recipe (hxrecipe), Project (hx, pgo), Demo, Data

This tutorial demonstrated how to quantify thickness distribution along the length

Learn more
Export Spatial Graph to MS Excel XML document

Export Spatial Graph to MS Excel XML document

Recipe (hxrecipe), Tcl, Demo

An Amira-Avizo recipe to export to a XML document which can be used in MS Excel for further analysis.

Learn more
Different methods to measure the volume of fibers generated by XFiber extension

Different methods to measure the volume of fibers generated by XFiber extension

Project (hx, pgo), Demo

This guideline aims to identify different ways to analyze the volume fraction of fibers traced by the XFiber extension.

Learn more
Berea Pore Size Distribution Tutorial

Berea Pore Size Distribution Tutorial

Recipe (hxrecipe), Project (hx, pgo), Demo, Data

Create a semi-automatic workflow for Pore Size Distribution on Berea sandstone

Learn more