Welcome to the Xtra Library for
Thermo Scientific Amira, Avizo and PerGeos Software
Below you will find a collection of add-ons (recipes, scripts, demos,…) that will help you improve your day-to-day use of Amira-Avizo and PerGeos Software and make you gain both time and efficiency.
Use the Search field to look for specific keywords related to your domain of interest. The different filters also help you target specific resources.
Recipe ISP (hxisp,a2d)
25 Jun 2019 - This recipe segments nanoparticles of different element from an EDS map.
Automated sizing of large area nanoparticles
Recipe ISP (hxisp,a2d), Python (pyscro)
25 Jun 2019 - The recipe segments large area Pt-Rh nanoparticles at high resolution (TEM image).
Size distribution of Nb-Cu nanoparticles
Recipe ISP (hxisp,a2d), Data
26 Jun 2019 - The recipe segments the Nb particles and the Cu particles.
Recipe ISP (hxisp,a2d)
3 Jul 2020 - This is a workflow to segment out osteocytes present in mouse bone sample using Amira2D
Segmentation of agglomerated Ni nanoparticles
Recipe ISP (hxisp,a2d)
24 Aug 2020 - This recipe segments overlapping Ni nanoparticles on a high resolution STEM image after which a size distribution of the nanoparticles can also be computed