Welcome to the Xtra Library for
Thermo Scientific Amira, Avizo and PerGeos Software
Below you will find a collection of add-ons (recipes, scripts, demos,…) that will help you improve your day-to-day use of Amira-Avizo and PerGeos Software and make you gain both time and efficiency.
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Recipe ISP (hxisp,a2d)
25 Jun 2019 - This recipe segments nanoparticles of different element from an EDS map.
Automated sizing of large area nanoparticles
Recipe ISP (hxisp,a2d), Python (pyscro)
25 Jun 2019 - The recipe segments large area Pt-Rh nanoparticles at high resolution (TEM image).
Size distribution of Nb-Cu nanoparticles
Recipe ISP (hxisp,a2d), Demo, Data
26 Jun 2019 - The recipe segments the Nb particles and the Cu particles.
Recipe ISP (hxisp,a2d)
3 Jul 2020 - This is a workflow to segment out osteocytes present in mouse bone sample using Amira2D
Segmentation of agglomerated Ni nanoparticles
Recipe ISP (hxisp,a2d)
24 Aug 2020 - This recipe segments overlapping Ni nanoparticles on a high resolution STEM image after which a size distribution of the nanoparticles can also be computed