Efficient Graph-based 2D Image Segmentation
XPand module
12 Feb 2021 - This Xtra implements efficient graph-based image segmentation by Felzenszwalb and Huttenlocher. Learn more
Demo
10 Feb 2021 - This tutorial explains how to create and export a movie file from the Animation Director. Learn more
How to Compare Slices Side by Side
Demo
10 Feb 2021 - This tutorial explains how to perform a side-by-side comparison of two slices that display different information; for example, of raw data and its corresponding labeled image. Learn more
Python (pyscro)
22 Jan 2021 - This Python script-object allows you to convert a point-cloud object to a spreadsheet object. Learn more
Non-Standard Python Package Installation Tutorial
Demo, Misc
13 Jan 2021 - This Xtra provides a brief video that explains how to install a Python package in a newly created Python environment using pip or edm. Learn more
FIBSEM Mitochondria Segmentation
Deep learning model
12 Jan 2021 - Pre-trained model for the Deep Learning Prediction module detecting mitochondria in a Focused Ion Beam Scanning Electron Microscope (FIBSEM) data set. Learn more
Multi-Component Analysis of X-ray Computed Tomography Datasets
Recipe (hxrecipe), Project (hx, pgo), Demo, Data, Misc
4 Jan 2021 - The following videos and training material detail the steps taken to automate the analysis of multiple parts in a single X-ray CT volume. Learn more
Analysis of X-ray CT Calibration Spheres using the Metrology Workroom
Demo, Data, Misc
4 Jan 2021 - This video presents how to use the Metrology workroom to analyze calibration spheres used in X-ray Computed Tomography. Learn more
Python (pyscro), Data
4 Jan 2021 - This module performs an adaptive global thresholding of the input image by computing a deviation from the mean of its grayscale values. Learn more
How to Create and Animate a Camera Path
Demo
3 Jan 2021 - This tutorial explains how to create a camera path, and then animate the camera along this path with the Animation Director. Learn more
How to Animate the Appearance of Objects with the Animation Director
Demo
3 Jan 2021 - This tutorial explains how to animate the appearance and disappearance of objects with the Animation Director. Learn more
How to Get Started with the Animation Director
Demo
3 Jan 2021 - This tutorial demonstrates the basic techniques of animation creation with the Animation Director. Learn more
Tcl
17 Nov 2020 - This module creates a spreadsheet that contains the measurement and annotation data (generated with the Measurement tool) that can be used for further analysis. Learn more
Recipe ISP, IVP, A2D
17 Nov 2020 - A recipe for applying a Marker Based Watershed (as in the Segmentation Editor) from the Project View. Learn more
Automatic Extraction of Surface Cross Section
Python (pyscro), Project (hx, pgo)
20 Oct 2020 - A module for creating partially transparent capping surfaces. Learn more
Auto Threshold for Multi-Thresholding
Tcl
19 Oct 2020 - The combination of Auto Thresholding and Multi-Thresholding makes it easy to create precise surfaces without additional smoothing, using the Generate Surface's smoothing option "Existing Weights". Learn more
Python (pyscro)
19 Oct 2020 - This Xtra creates a volume projection along any orthogonal axis using arithmetic operations. Learn more
Relative Area Fraction for Amira-Avizo2D
Recipe ISP, IVP, A2D, Python (pyscro), Data, Misc
5 Oct 2020 - This Xtra provides a module to help compute the area fraction of a label over the area of another label in Amira-Avizo2D. Learn more
Demo
5 Oct 2020 - This Xtra provides a brief video that explains how to set up an AMIRA_LOCAL path on Windows 10. Learn more
Explode Surface Animation Script
Tcl
5 Oct 2020 - A script that will animate the expansion of pieces of a surface. Contains the script, documentation, an example surface, and a video of the finished result. Learn more
PerGeos Process Based Modelling
XPand module
4 Sep 2020 - Process Based Modelling modules for PerGeos Learn more