How to Get Started with the Animation Director
How-to

How to Get Started with the Animation Director

Demo

3 Jan 2021 - This tutorial demonstrates the basic techniques of animation creation with the Animation Director.  Learn more

Export Measures
Add-on

Export Measures

Tcl

17 Nov 2020 - This module creates a spreadsheet that contains the measurement and annotation data (generated with the Measurement tool) that can be used for further analysis.  Learn more

Marker Based Watershed Recipe
Add-on

Marker Based Watershed Recipe

Recipe ISP, IVP, A2D

17 Nov 2020 - A recipe for applying a Marker Based Watershed (as in the Segmentation Editor) from the Project View.  Learn more

Automatic Extraction of Surface Cross Section
Add-on How-to

Automatic Extraction of Surface Cross Section

Python (pyscro), Project (hx, pgo)

20 Oct 2020 - A module for creating partially transparent capping surfaces.  Learn more

Auto Threshold for Multi-Thresholding
Add-on

Auto Threshold for Multi-Thresholding

Tcl

19 Oct 2020 - The combination of Auto Thresholding and Multi-Thresholding makes it easy to create precise surfaces without additional smoothing, using the Generate Surface's smoothing option "Existing Weights".  Learn more

Volume Projection
Add-on

Volume Projection

Python (pyscro)

19 Oct 2020 - This Xtra creates a volume projection along any orthogonal axis using arithmetic operations.  Learn more

AMIRA_LOCAL Setup Tutorial
How-to

AMIRA_LOCAL Setup Tutorial

Demo

5 Oct 2020 - This Xtra provides a brief video that explains how to set up an AMIRA_LOCAL path on Windows 10.  Learn more

Explode Surface Animation Script
Add-on

Explode Surface Animation Script

Tcl

5 Oct 2020 - A script that will animate the expansion of pieces of a surface. Contains the script, documentation, an example surface, and a video of the finished result.  Learn more

Apply a Recipe on a Batch of Files
Add-on

Apply a Recipe on a Batch of Files

Recipe (hxrecipe), Tcl

25 Aug 2020 - Apply a recipe to a batch of files and save the results in an output directory.  Learn more

Selective Border Kill
Add-on

Selective Border Kill

Tcl

24 Aug 2020 - A module that allows you to filter particles selectively, based on their contact with each border of the image.  Learn more

2D Cell Tracking Example
Add-on

2D Cell Tracking Example

Recipe (hxrecipe), Project (hx, pgo), Demo, Data

24 Aug 2020 - A 2D cell tracking example from a multichannel time series data set. Contains a segmentation recipe, modules needed to track the cells through time, and a video of the finished result.  Learn more

Segmentation of agglomerated Ni nanoparticles
Add-on

Segmentation of agglomerated Ni nanoparticles

Recipe ISP, IVP, A2D

24 Aug 2020 - This recipe segments overlapping Ni nanoparticles on a high resolution STEM image after which a size distribution of the nanoparticles can also be computed  Learn more

Cell Detection and Tracking 2020.2
Add-on How-to

Cell Detection and Tracking 2020.2

Recipe ISP, IVP, A2D, Python (pyscro), Project (hx, pgo), Demo

21 Aug 2020 - Simple workflow for tracking cell nuclei in a 3D Time Series.  Learn more

Hough Circle Fitting
Add-on

Hough Circle Fitting

Python (pyscro)

30 Jul 2020 - Generalized Hough transform to fit circles to the image.  Learn more

Multi-Scale Cylinder Correlation
Add-on How-to

Multi-Scale Cylinder Correlation

Python (pyscro), Project (hx, pgo)

30 Jul 2020 - This module gives better results for fiber-tracing in the case of multiple fibers with differing or varying diameters in the same dataset.  Learn more

Create a porosity analysis recipe
How-to

Create a porosity analysis recipe

Recipe (hxrecipe), Demo

15 Jul 2020 - This tutorial explains how to create a simple porosity analysis and turn it into a push-button recipe.  Learn more

Cylinder Slice with Native Resolution in Z
Add-on

Cylinder Slice with Native Resolution in Z

XPand module

10 Jul 2020 - This Xtra module is a version of the Cylinder Slice module that sets the resolution, in the Z direction, of the extracted image to the native resolution of the input data.  Learn more

Segment TEM data without artifact  and background effect
Add-on

Segment TEM data without artifact and background effect

Recipe (hxrecipe), Tcl, Project (hx, pgo)

10 Jul 2020 - Segment TEM data aided by the Structure enhancement filter.  Learn more

Extracting and Visualizing Local Statistics from Fibrous Materials
Add-on How-to

Extracting and Visualizing Local Statistics from Fibrous Materials

Project (hx, pgo)

3 Jul 2020 - This XTRA entry discusses the application of the “Spatial Graph Local Statistics” to extract statistical information from traced fibers in a fibrous material. The sample is 50% glass fiber-reinforced polymer (GFRP), courtesy of EMS Grivory.  Learn more

Interactive Top-Hat by Reconstruction
Add-on How-to

Interactive Top-Hat by Reconstruction

XPand module

3 Jul 2020 - This module provides an interactive Top-Hat segmentation that prevents the segmentation of "false positive" porosity on the edges.  Learn more

 Imaging Codec for thumbnails in Windows Explorer
Add-on

Imaging Codec for thumbnails in Windows Explorer

Misc

24 Jun 2020 - Codec enabling thumbnails for .am images in Windows Explorer  Learn more