Xtras Installer for Amira-Avizo 2023.1 and Prior
Add-on

Xtras Installer for Amira-Avizo 2023.1 and Prior

Recipe (hxrecipe), Recipe ISP, IVP, A2D, Deep learning model, Python (pyscro), Tcl, XPand module, Project (hx, pgo), Template, Demo, Data, Misc

30 Jun 2022 - The Xtras Installer is a tool that provides an easy way to install resources from the Xtra Library on to your local machine.  Learn more

Object Separation using Random-Walk Distance Map
Add-on

Object Separation using Random-Walk Distance Map

Recipe ISP, IVP, A2D, Demo, Data

3 Jun 2022 - Recipe utilizing an object separation workflow relying on the Random-Walk Distance Map. It is more robust than Separate Object for noisy segmentation or non-spherical shapes.  Learn more

Bone Segmentation Workflow for Murine Hindpaw
Add-on How-to

Bone Segmentation Workflow for Murine Hindpaw

Recipe ISP, IVP, A2D, Demo, Data

28 Apr 2022 - Semi-automatic workflow and recipe for high-throughput bone segmentation of murine hindpaw micro-CT datasets.  Learn more

How to Use the Image Recipe Designer Workroom
How-to

How to Use the Image Recipe Designer Workroom

Recipe ISP, IVP, A2D, Demo

14 Sep 2021 - This tutorial demonstrates how to use the Image Recipe Designer (formerly 'Image Stack Processing' or 'ISP') workroom, an intuitive 2D workroom for automating image processing workflows in 3D.  Learn more

Marker Based Watershed Recipe
Add-on

Marker Based Watershed Recipe

Recipe ISP, IVP, A2D

17 Nov 2020 - A recipe for applying a Marker Based Watershed (as in the Segmentation Editor) from the Project View.  Learn more

Relative Area Fraction for Amira-Avizo2D
Add-on How-to

Relative Area Fraction for Amira-Avizo2D

Recipe ISP, IVP, A2D, Python (pyscro), Data, Misc

5 Oct 2020 - This Xtra provides a module to help compute the area fraction of a label over the area of another label in Amira-Avizo2D.  Learn more

Segmentation of agglomerated Ni nanoparticles
Add-on

Segmentation of agglomerated Ni nanoparticles

Recipe ISP, IVP, A2D

24 Aug 2020 - This recipe segments overlapping Ni nanoparticles on a high resolution STEM image. A size distribution of the nanoparticles can also be computed.  Learn more

Segmentation of Pathological Osteocytes in an Undecalcified Piece of Mouse Bone using Amira-Avizo2D
Add-on

Segmentation of Pathological Osteocytes in an Undecalcified Piece of Mouse Bone using Amira-Avizo2D

Recipe ISP, IVP, A2D

3 Jul 2020 - This is a workflow to segment out osteocytes in mouse bone sample using Amira-Avizo2D.  Learn more

How to Use Deep Learning Models in Amira-Avizo2D Analyzer
Add-on

How to Use Deep Learning Models in Amira-Avizo2D Analyzer

Recipe ISP, IVP, A2D, Deep learning model, Data

3 Oct 2019 - Examples showing how to use AI (deep learning models) in an Analyzer recipe (hxisp).  Learn more

How to Batch Process an Image Recipe on a Set of 2D Images with Amira-Avizo2D
Add-on How-to

How to Batch Process an Image Recipe on a Set of 2D Images with Amira-Avizo2D

Recipe ISP, IVP, A2D, Data

18 Sep 2019 - Example of a batch file to perform batch processing on a set of porous silicon SEM images.  Learn more

Three Phase Ti Segmentation
Add-on

Three Phase Ti Segmentation

Recipe ISP, IVP, A2D, Data

24 Jul 2019 - Alpha, Borides, Beta segmentation of FIB Serial Section Dataset of Ti Alloy with Borides  Learn more

Plates in Ti-62222
Add-on

Plates in Ti-62222

Recipe ISP, IVP, A2D, Data

24 Jul 2019 - FIB Serial Section of Ti-62222  Learn more

Particles identification in Nickel-Base Superalloy
Add-on

Particles identification in Nickel-Base Superalloy

Recipe ISP, IVP, A2D, Python (pyscro), Data

24 Jul 2019 - FIB Serial Section of Particles in Nickel-Base Superalloy  Learn more

Size distribution of Nb-Cu nanoparticles
Add-on

Size distribution of Nb-Cu nanoparticles

Recipe ISP, IVP, A2D, Data

26 Jun 2019 - The recipe segments the Nb particles and the Cu particles.  Learn more

Detecting Pores in Porous Silicon
Add-on

Detecting Pores in Porous Silicon

Recipe ISP, IVP, A2D, Data

26 Jun 2019 - The recipe detects pores in porous silicon.  Learn more

Porosity in a Battery Separator
Add-on

Porosity in a Battery Separator

Recipe ISP, IVP, A2D, Data

26 Jun 2019 - The recipe classifies the pores in a battery separator (SEM image).  Learn more

Porosity in a Polymer Divider
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Porosity in a Polymer Divider

Recipe ISP, IVP, A2D, Demo, Data

26 Jun 2019 - The recipe detects pores in a polymer divider (SEM image).  Learn more

Particle Agglomeration
Add-on

Particle Agglomeration

Recipe ISP, IVP, A2D, Data

26 Jun 2019 - The recipe segments particles that are touching each other, and individual ones.  Learn more

Automated Sizing of Large Area Nanoparticles
Add-on

Automated Sizing of Large Area Nanoparticles

Recipe ISP, IVP, A2D, Python (pyscro)

25 Jun 2019 - The recipe segments large area Pt-Rh nanoparticles at high resolution (TEM image).  Learn more

Au-Ni-Cl Nanoparticles
Add-on

Au-Ni-Cl Nanoparticles

Recipe ISP, IVP, A2D

25 Jun 2019 - This recipe segments nanoparticles of different element from an EDS map.  Learn more

Polymer Beads
Add-on

Polymer Beads

Recipe ISP, IVP, A2D

6 Jun 2019 - Segmentation of the particles located in the foreground of the SEM image.  Learn more