Automatic Extraction of Surface Cross Section
Python (pyscro), Project (hx, pgo)
20 Oct 2020 - A module for creating partially transparent capping surfaces. Learn more
Python (pyscro)
19 Oct 2020 - This Xtra creates a volume projection along any orthogonal axis using arithmetic operations. Learn more
Relative Area Fraction for Amira-Avizo2D
Recipe ISP, IVP, A2D, Python (pyscro), Data, Misc
5 Oct 2020 - This Xtra provides a module to help compute the area fraction of a label over the area of another label in Amira-Avizo2D. Learn more
Recipe ISP, IVP, A2D, Python (pyscro), Project (hx, pgo), Demo
21 Aug 2020 - Simple workflow for tracking cell nuclei in a 3D Time Series. Learn more
Python (pyscro)
30 Jul 2020 - This module uses Generalized Hough-transform to detect circles in an image. Learn more
Multi-Scale Cylinder Correlation
Python (pyscro), Project (hx, pgo)
30 Jul 2020 - This module gives better results for fiber-tracing in the case of multiple fibers with differing or varying diameters in the same dataset. Learn more
Optical Thin Section Pore Space Characterization in HSV colorspace
Python (pyscro), Project (hx, pgo), Data
10 Jul 2020 - Optical Thin Section Pore Space is segmented converting RGBA images in HSV colorspace by means of Python scripts. Learn more
Python (pyscro)
11 May 2020 - This module extracts a specified label region by its ID. Learn more
Scale-Space Laplacian of Gaussian Filter
Python (pyscro)
15 Apr 2020 - Image processing filter enhancing spherical or blob like objects of various sizes. Learn more
Python (pyscro), Project (hx, pgo)
21 Oct 2019 - The purpose of this python script object is to average interleaved data. Learn more
Load a Numpy array into PerGeos/Amira-Avizo using the Python API
Python (pyscro)
21 Oct 2019 - This script simply reads and loads numpy arrays in a user specified directory into PerGeos/Amira-Avizo as an image. Learn more
Random Forests for Multiclass Segmentation using Python API in PerGeos
Python (pyscro), Project (hx, pgo), Data
21 Oct 2019 - Simple demonstration of feature computation where the feature vector contains intensity and 2D eigenvalues (X & Y). This example uses random forests implementation from the sklearn package. Learn more
Python (pyscro)
17 Oct 2019 - This module allows the user to compute the volume fraction per separated region depending on depth from the surface of a segmented object. Learn more
Parameter optimization for auto-thresholding a data
Python (pyscro), Project (hx, pgo), Data
7 Oct 2019 - In this pyscro example we use opencv and matplotlib to automatically calculate an optimized parameter for thresholding the data based on various metrics. Learn more
How to use PyQt5 in a pyscro module
Python (pyscro)
7 Oct 2019 - This example shows how to use PyQt5 in a pyscro module. Learn more
Python (pyscro)
3 Oct 2019 - This module allows the user to convert a scalar/vector/tensor field into a spreadsheet containing the X,Y,Z positions and the values of the field. Learn more
Particles identification in Nickel-Base Superalloy
Recipe ISP, IVP, A2D, Python (pyscro), Data
24 Jul 2019 - FIB Serial Section of Particles in Nickel-Base Superalloy Learn more
Automated sizing of large area nanoparticles
Recipe ISP, IVP, A2D, Python (pyscro)
25 Jun 2019 - The recipe segments large area Pt-Rh nanoparticles at high resolution (TEM image). Learn more