Iterate Recipe
Add-on

Iterate Recipe

Python (pyscro)

17 Nov 2022 - This module allows you to run a given recipe while varying a chosen parameter value of any of the modules making up the recipe.  Learn more

How to Install the Deep Learning Python Environment
How-to

How to Install the Deep Learning Python Environment

Python (pyscro), Demo, Misc

29 Jul 2022 - Two videos explain how to install the dependencies needed to use Deep Learning within Amira 3D, Avizo 3D, or Pergeos. One covers the standard install and the other is for users without an internet connection.  Learn more

How to Segment Cavities Using the Compute Ambient Occlusion Module
How-to

How to Segment Cavities Using the Compute Ambient Occlusion Module

Demo

12 Apr 2022 - This tutorial demonstrates how to segment pores or cavities using the Compute Ambient Occlusion module.  Learn more

How to Use the Surface View Module and Create Elaborate Surface Renderings
How-to

How to Use the Surface View Module and Create Elaborate Surface Renderings

Demo

30 Dec 2021 - This short video demonstrates the basic use of the Surface View module, and how to combine several Surface View modules to create elaborate renderings.  Learn more

Facies Classification from Well Logs
Add-on How-to

Facies Classification from Well Logs

Python (pyscro), Demo

3 Dec 2021 - Facies (rock type) classification from well logs using supervised machine learning algorithms.  Learn more

kMeans Clustering on Label Analysis (Python)
Add-on

kMeans Clustering on Label Analysis (Python)

Python (pyscro)

18 Nov 2021 - This Xtra implements kMeans clustering on a label analysis spreadsheet. Separated objects can be clustered based on any measure group that is inbuilt or user customized.  Learn more

CMake Usage to Create XPand C++ API Modules
How-to

CMake Usage to Create XPand C++ API Modules

Demo

18 Nov 2021 - Starting with version 2021.2, the use of CMake is required to create solutions that implement the Amira Avizo 3D Pro extension modules with the XPand C ++ API. This video demonstrates what needs to be done to create a solution for MS Visual Studio.  Learn more

How to Set the Colormap for Ortho Slice and Volume Rendering
How-to

How to Set the Colormap for Ortho Slice and Volume Rendering

Demo

18 Nov 2021 - This tutorial is an introduction to the basic principle and use of colormaps.  Learn more

How to Register and Merge Images
How-to

How to Register and Merge Images

Demo

14 Sep 2021 - This short tutorial demonstrates how to use the Register Images and Merge modules to align and merge two images.  Learn more

How to Use the Transform Editor
How-to

How to Use the Transform Editor

Demo

14 Sep 2021 - This tutorial introduces the concept of geometric transformation in Amira-Avizo and demonstrates data alignment with the Transform Editor.  Learn more

How to Create a Custom Label Colormap
How-to

How to Create a Custom Label Colormap

Demo

14 Sep 2021 - This short video explains how to create and export a label colormap from the Segmentation Editor.  Learn more

How to Change the Label Colormap to Display a Label Field
How-to

How to Change the Label Colormap to Display a Label Field

Demo

14 Sep 2021 - This short video explains how to set an appropriate colormap for label fields with a large number of labels.  Learn more

How to Edit a Colormap from the Colormap Editor
How-to

How to Edit a Colormap from the Colormap Editor

Demo

14 Sep 2021 - This tutorial demonstrates how to use the Colormap Editor.  Learn more

How to Save a Project
How-to

How to Save a Project

Demo

14 Sep 2021 - This short tutorial presents the different options to save a project.  Learn more

Image Segmentation Evaluation Using Standard Metrics
Add-on

Image Segmentation Evaluation Using Standard Metrics

Python (pyscro), Project (hx, pgo)

8 Mar 2021 - Segmentation evaluation using standard precision, and recall metrics for comparing two segmentation labels.  Learn more

Large Data Visualization
Add-on How-to

Large Data Visualization

Demo, Misc

24 Feb 2021 - This video tutorial demonstrates how to deal with visualization of large datasets.  Learn more

Patch Extraction Tools for Deep Learning Data Preparation
Add-on

Patch Extraction Tools for Deep Learning Data Preparation

Python (pyscro)

22 Feb 2021 - A set of tools dedicated to the preparation of data for training Deep Learning models and reducing annotation time.  Learn more

Non-Standard Python Package Installation Tutorial
How-to

Non-Standard Python Package Installation Tutorial

Demo, Misc

13 Jan 2021 - This Xtra provides a brief video that explains how to install a Python package in a newly created Python environment using pip or edm.  Learn more

AMIRA_LOCAL Setup Tutorial
How-to

AMIRA_LOCAL Setup Tutorial

Demo

5 Oct 2020 - This Xtra provides a brief video that explains how to set up an AMIRA_LOCAL path on Windows 10.  Learn more

Cylinder Slice with Native Resolution in Z
Add-on

Cylinder Slice with Native Resolution in Z

XPand module

10 Jul 2020 - This Xtra module is a version of the Cylinder Slice module that sets the resolution, in the Z direction, of the extracted image to the native resolution of the input data.  Learn more

Optical Thin Section Pore Space Characterization in HSV colorspace
Add-on How-to

Optical Thin Section Pore Space Characterization in HSV colorspace

Python (pyscro), Project (hx, pgo), Data

10 Jul 2020 - Optical Thin Section Pore Space is segmented converting RGBA images in HSV colorspace by means of Python scripts.  Learn more