AI Assisted Tool for CryoEM Segmentation
Demo, Data
28 Nov 2022 - Here we provide a tutorial to interactively segment a cellular cryo-electron tomography image using the AI assisted segmentation tool of the Segmentation+ workroom. Learn more
How to Calculate Surface Area of a Custom ROI
Demo, Data
29 Jul 2022 - This tutorial elaborates how to draw a region of interest on a surface. With this ROI, you can calculate its surface area. Learn more
Xtras Installer for Amira-Avizo 2023.1 and Prior
Recipe (hxrecipe), Recipe ISP, IVP, A2D, Deep learning model, Python (pyscro), Tcl, XPand module, Project (hx, pgo), Template, Demo, Data, Misc
30 Jun 2022 - The Xtras Installer is a tool that provides an easy way to install resources from the Xtra Library on to your local machine. Learn more
Porosity Volume Fraction Analysis
Project (hx, pgo), Demo, Data
18 Nov 2021 - This tutorial demonstrates the steps to quantify porosity volume fraction and distribution. Learn more
Inter Time Steps Recipe Player
Recipe (hxrecipe), Python (pyscro), Project (hx, pgo), Demo, Data
18 Nov 2021 - The Inter Time Steps Recipe Player module executes a two-input recipe to a specific pair of two successive time steps of a time series dataset, or to all its pairs of two successive time steps. Learn more
Component Verification Using X-ray Computed Tomography and CAD Comparison
Demo, Data, Misc
3 Mar 2021 - The following video and training material uses an additively manufactured con rod to demonstrate how the surface profile generated from X-ray CT data can be compared to the original component CAD design. Learn more
Multi-Component Analysis of X-ray Computed Tomography Datasets
Recipe (hxrecipe), Project (hx, pgo), Demo, Data, Misc
4 Jan 2021 - The following videos and training material detail the steps taken to automate the analysis of multiple parts in a single X-ray CT volume. Learn more
Analysis of X-ray CT Calibration Spheres using the Metrology Workroom
Demo, Data, Misc
4 Jan 2021 - This video presents how to use the Metrology workroom to analyze calibration spheres used in X-ray Computed Tomography. Learn more
Python (pyscro), Data
4 Jan 2021 - This module performs an adaptive global thresholding of the input image by computing a deviation from the mean of its grayscale values. Learn more
Relative Area Fraction for Amira-Avizo2D
Recipe ISP, IVP, A2D, Python (pyscro), Data, Misc
5 Oct 2020 - This Xtra provides a module to help compute the area fraction of a label over the area of another label in Amira-Avizo2D. Learn more
Tcl, Project (hx, pgo), Data
17 Jun 2020 - To make use of XFiber, the user usually needs to input many parameters. This package provides 2 tools to ease Xfiber process by presetting Cylinder Correlation and Auto Trace Correlation modules values. Learn more
Molar Segmentation Using Watershed, Top-Hat, and Surface Generation
Project (hx, pgo), Demo, Data
11 May 2020 - Data, tutorial, and complete project for segmenting a CT-scanned human molar artifact. The tutorial and project cover advanced image segmentation and surface generation. Learn more
2D SEM (White) Grain Segmentation
Recipe (hxrecipe), Data
21 Oct 2019 - This recipe segments and calculate the physical attributes of the white grains in the 2D SEM image Learn more
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
21 Oct 2019 - This tutorial demonstrated how to quantify thickness distribution along the length Learn more
Porosity Clustering Analysis and Distance to Surface
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
21 Oct 2019 - This tutorial demonstrates the steps necessary to quantify porosity distribution and perform a pore distance to surface analysis. Learn more
Cracks and Cavities Segmentation in CT Data
Recipe (hxrecipe), Data
21 Oct 2019 - This recipe is useful to segment data with cracks, pores, or cavities. Learn more
Recipe (hxrecipe), Demo, Data
16 Oct 2019 - The calculation of a relative pore fraction for each separated grains. Learn more
Recipe (hxrecipe), XPand module, Data
14 Oct 2019 - Module for sequencing a recipe on each individual isolated label from a label field. Learn more
Tutorial: Generate a DVC Mesh of Complex Shapes
Demo, Data
10 Oct 2019 - This tutorial describes how to build a DVC mesh for specimens with complex shapes. Learn more
Parameter optimization for auto-thresholding a data
Python (pyscro), Project (hx, pgo), Data
7 Oct 2019 - In this pyscro example we use opencv and matplotlib to automatically calculate an optimized parameter for thresholding the data based on various metrics. Learn more
How to Use Deep Learning Models in Amira-Avizo2D Analyzer
Recipe ISP, IVP, A2D, Deep learning model, Data
3 Oct 2019 - Examples showing how to use AI (deep learning models) in an Analyzer recipe (hxisp). Learn more