Welcome to the Xtra Library for
Thermo Scientific Amira, Avizo and PerGeos Software
Below you will find a collection of add-ons (recipes, scripts, demos,…) that will help you improve your day-to-day use of Amira-Avizo and PerGeos Software and make you gain both time and efficiency.
Use the Search field to look for specific keywords related to your domain of interest. The different filters also help you target specific resources.
18 Nov 2021 - Starting with version 2021.2, the use of CMake is required to create solutions that implement the Amira Avizo 3D Pro extension modules with the XPand C ++ API. This video demonstrates what needs to be done to create a solution for MS Visual Studio.
18 Nov 2021 - This tutorial is an introduction to the basic principle and use of colormaps.
14 Sep 2021 - This short video explains how to set an appropriate colormap for label fields with a large number of labels.
Python (pyscro), Project (hx, pgo)
8 Mar 2021 - Segmentation evaluation using standard precision, and recall metrics for comparing two segmentation labels.
22 Feb 2021 - A set of tools dedicated to the preparation of data for training Deep Learning models and reducing annotation time.
Python (pyscro), Project (hx, pgo), Data
10 Jul 2020 - Optical Thin Section Pore Space is segmented converting RGBA images in HSV colorspace by means of Python scripts.