Eval on Spatial Graph New
Add-on

Eval on Spatial Graph

XPand module

8 Sep 2022 - This Xtra evaluates a scalar field at each point of a Spatial Graph and stores the result as thickness attribute of the resulting Spatial Graph.  Learn more

Volume Operations: Flip, Swap, Auto-Crop and Enlarge New
Add-on

Volume Operations: Flip, Swap, Auto-Crop and Enlarge

XPand module

8 Sep 2022 - This Xtra is a set of modules allowing to perform and automate volume operations on your data.  Learn more

Extract Objects New
Add-on

Extract Objects

XPand module

1 Sep 2022 - The Xtra module extracts single objects based on labels' information listed in a Label Analysis.  Learn more

Reconstruct Spatial Graph from Markers New
Add-on

Reconstruct Spatial Graph from Markers

XPand module

1 Sep 2022 - This Xtra filters a Spatial Graph to keep only segments that have at least one point in each of the labels of an input Label Field.  Learn more

How to Install the Deep Learning Python Environment New
How-to

How to Install the Deep Learning Python Environment

Python (pyscro), Demo, Misc

29 Jul 2022 - Two videos explain how to install the dependencies needed to use Deep Learning within Amira 3D, Avizo 3D, or Pergeos. One covers the standard install and the other is for users without an internet connection.  Learn more

How to Calculate Surface Area of a Custom ROI New
How-to

How to Calculate Surface Area of a Custom ROI

Demo, Data

29 Jul 2022 - This tutorial elaborates how to draw a region of interest on a surface. With this ROI, you can calculate its surface area.  Learn more

How to Calculate Surface Area New
How-to

How to Calculate Surface Area

Demo

29 Jul 2022 - Three approaches are shown for extracting a surface and measuring the surface area of its geometry.  Learn more

Plane Tools - Surface and Volume Distance to Plane and Spatial Graph Projection onto Plane New
Add-on

Plane Tools - Surface and Volume Distance to Plane and Spatial Graph Projection onto Plane

XPand module

26 Jul 2022 - This Xtra provides a set of three modules to compute distance and projection to a user-defined plane.  Learn more

Image Stack Builder
Add-on

Image Stack Builder

Python (pyscro)

10 Jun 2022 - This module merges together a set of several 2D/3D images into one single volume. It is very helpful for building a 2D image stack from a set of 2D images for ground truth definition.  Learn more

Object Separation using Random-Walk Distance Map
Add-on

Object Separation using Random-Walk Distance Map

Recipe ISP, IVP, A2D, Demo, Data

3 Jun 2022 - Recipe realizing an object separation workflow relying on Random-Walk Distance Map. It is more robust for noisy segmentation or non-spherical shapes, compared to Separate Object.  Learn more

Scientific Scalebar
Add-on

Scientific Scalebar

Python (pyscro)

13 May 2022 - This Xtra automatically sets the scalebar parameters to comply with the requirements for scientific papers.  Learn more

Efficient Graph-based 2D Image Segmentation
Add-on

Efficient Graph-based 2D Image Segmentation

XPand module

12 Feb 2021 - This Xtra implements efficient graph-based image segmentation by Felzenszwalb and Huttenlocher.  Learn more

Cylinder Slice with Native Resolution in Z
Add-on

Cylinder Slice with Native Resolution in Z

XPand module

10 Jul 2020 - This Xtra module is a version of the Cylinder Slice module that sets the resolution, in the Z direction, of the extracted image to the native resolution of the input data.  Learn more

Cracks and Cavities Segmentation in CT Data
Add-on

Cracks and Cavities Segmentation in CT Data

Recipe (hxrecipe), Data

21 Oct 2019 - This recipe is useful to segment data with cracks, pores, or cavities.  Learn more

Getting Started with Deep Learning Training for Image Segmentation
Add-on

Getting Started with Deep Learning Training for Image Segmentation

Deep learning model, Project (hx, pgo), Data

27 Jun 2019 - Model and companion project for the Deep Learning tutorial.  Learn more

BSE SEM denoiser
Add-on

BSE SEM denoiser

Deep learning model

21 Jun 2019 - U-Net model for denoising back-scattered SEM images.  Learn more